Publikationen von Patrick Giavalisco

1.

Zeitschriftenartikel

Aarabi, F.; Salem, M. A.; Arrivault, S.; Bulut, M.; Schöttler, M. A.; Giavalisco, P.; Fernie, A. R.; Hoefgen, R.: The regulation of sulfolipids under sulfur starvation. Plant Molecular Biology 112, S. 195 - 198 (2023)

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Aarabi, F.; Rakpenthai, A.; Barahimipour, R.; Gorka, M.; Alseekh, S.; Zhang, Y.; Salem, M.A.; Brückner, F.; Omranian, N.; Watanabe, M. et al.; Nikoloski, Z.; Giavalisco, P.; Tohge, T.; Graf, A.; Fernie, A. R.; Hoefgen, R.: Sulfur Deficiency Induced genes affect seed protein accumulation and composition under sulfate deprivation. Plant Physiology 187 (4), S. 2419 - 2434 (2021)

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3.

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Zimmermann, S. E.; Benstein, R. M.; Flores-Tornero, M.; Blau, S.; Anoman, A. D.; Rosa-Téllez, S.; Gerlich, S. C.; Salem, M.A.; Alseekh, S.; Kopriva, S. et al.; Wewer, V.; Flügge, U.-I.; Jacoby, R. P.; Fernie, A. R.; Giavalisco, P.; Ros, R.; Krueger, S.: The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism. Plant Physiology 186 (3), S. 1487 - 1506 (2021)

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4.

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Salem, M. A.; Ezzat, S. M.; Giavalisco, P.; Sattar, E. A.; El Tanbouly, N.: Application of a comprehensive metabolomics approach for the selection of flaxseed varieties with the highest nutritional and medicinal attributes. Journal of Food and Drug Analysis 29 (2), 3 (2021)

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5.

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Salem, M.A.; Yoshida, T.; de Souza, L. P.; Alseekh, S.; Bajdzienko, K.; Fernie, A. R.; Giavalisco, P.: An improved extraction method enables the comprehensive analysis of lipids, proteins, metabolites and phytohormones from a single sample of leaf tissue under water-deficit stress. The Plant Journal 103 (4), S. 1614 - 1632 (2020)

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6.

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Yu, Q.; He, Z.; Zubkov, D.; Huang, S.; Kurochkin, I.; Yang, X.; Halene, T.; Willmitzer, L.; Giavalisco, P.; Akbarian, S. et al.; Khaitovich, P.: Lipidome alterations in human prefrontal cortex during development, aging, and cognitive disorders. Molecular Psychiatry 25 (11), S. 2952 - 2969 (2020)

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7.

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Bozek, K.; Khrameeva, E. E.; Reznick, J.; Omerbašić, D.; Bennett, N. C.; Lewin, G. R.; Azpurua, J.; Gorbunova, V.; Seluanov, A.; Regnard, P. et al.; Wanert, F.; Marchal, J.; Pifferi, F.; Aujard, F.; Liu, Z.; Shi, P.; Pääbo, S.; Schröder, F.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Publisher Correction: Lipidome determinants of maximal lifespan in mammals. Scientific Reports 9 (1), 6972 (2019)

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8.

Zeitschriftenartikel

Salem, M.A.; Giavalisco, P.: Regulatory-Associated Protein of TOR 1B (RAPTOR1B) regulates hormonal switches during seed germination in Arabidopsis thaliana. Plant Signaling & Behavior 14 (7), e1613130 (2019)

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9.

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Salem, M.A.; Giavalisco, P.: Mutation in the Arabidopsis regulatory-associated protein TOR 1B (RAPTOR1B) leads to decreased jasmonates levels in leaf tissue. Plant Signaling & Behavior 14 (10), e1649567 (2019)

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10.

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Sobanski, J.; Giavalisco, P.; Fischer, A.; Kreiner, J.M.; Walther, D.; Schöttler, M. A.; Pellizzer, T.; Golczyk, H.; Obata, T.; Bock, R. et al.; Sears, B.B.; Greiner, S.: Chloroplast competition is controlled by lipid biosynthesis in evening primroses. Proceedings of the National Academy of Sciences of the United States of America 116 (12), S. 5665 - 5674 (2019)

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11.

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Van Dingenen, J.; Hanzalova, K.; Salem, M.A.; Abel, C.; Seibert, T.; Giavalisco, P.; Wahl, V.: Limited nitrogen availability has cultivar-dependent effects on potato tuber yield and tuber quality traits. Food Chemistry 288, S. 170 - 177 (2019)

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12.

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Zuther, E.; Schaarschmidt, S.; Fischer, A.; Erban, A.; Pagter, M.; Mubeen, U.; Giavalisco, P.; Kopka, J.; Sprenger, H.; Hincha, D. K.: Molecular signatures associated with increased freezing tolerance due to low temperature memory in Arabidopsis. Plant, Cell and Environment 42 (3- SI), S. 854 - 873 (2019)

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13.

Zeitschriftenartikel

Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), S. 392 - 406 (2018)

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14.

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Farag, M. A.; Meyer, A.; Ali, S. E.; Salem, M.A.; Giavalisco, P.; Westphal, H.; Wessjohann, L. A.: Comparative Metabolomics Approach Detects Stress-Specific Responses during Coral Bleaching in Soft Corals. Journal of Proteome Research 17 (6), S. 2060 - 2071 (2018)

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15.

Zeitschriftenartikel

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Wiszniewski, A.A.G.; Steinhauser, D.; Giavalisco, P.: The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant Journal 93 (2), S. 355 - 376 (2018)

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16.

Zeitschriftenartikel

Khrameeva, E.; Kurochkin, I.; Bozek, K.; Giavalisco, P.; Khaitovich, P.: Lipidome Evolution in Mammalian Tissues. Molecular Biology and Evolution 35 (8), S. 1947 - 1957 (2018)

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17.

Zeitschriftenartikel

Klein, O.; Hanke, T.; Nebrich, G.; Yan, J.; Schubert, B.; Giavalisco, P.; Noack, F.; Thiele, H.; Mohamed, S. A.: Imaging Mass Spectrometry for Characterization of Atrial Fibrillation Subtypes. Proteomics Clinical Applications 12 (6), 1700155 (2018)

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18.

Zeitschriftenartikel

Klein, O.; Strohschein, K.; Nebrich, G.; Fuchs, M.; Thiele, H.; Giavalisco, P.; Duda, G. N.; Winkler, T.; Kobarg, J. H.; Trede, D. et al.; Geissler, S.: Unraveling local tissue changes within severely injured skeletal muscles in response to MSC-based intervention using MALDI Imaging mass spectrometry. Scientific Reports 8 (1), 12677 (2018)

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19.

Zeitschriftenartikel

Mubeen, U.; Jueppner, J.; Alpers, J.; Hincha, D. K.; Giavalisco, P.: Target of Rapamycin Inhibition in Chlamydomonas reinhardtii Triggers de Novo Amino Acid Synthesis by Enhancing Nitrogen Assimilation. The Plant Cell 30 (10), S. 2240 - 2254 (2018)

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20.

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Salem, M.A.; Li, Y.; Bajdzienko, K.; Fisahn, J.; Watanabe, M.; Hoefgen, R.; Schöttler, M. A.; Giavalisco, P.: RAPTOR controls developmental growth transitions by altering the hormonal and metabolic balance. Plant Physiology 177 (2), S. 565 - 593 (2018)

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21.

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Zhang, Y.; Zhang, Y.; McFarlane, H. E.; Obata, T.; Richter, A. S.; Lohse, M.; Grimm, B.; Persson, S.; Fernie, A. R.; Giavalisco, P.: Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation. Plant Physiology 178 (1), S. 101 - 117 (2018)

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22.

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Barbash, S.; Garfinkel, B. P.; Maoz, R.; Simchovitz, A.; Nadorp, B.; Guffanti, A.; Bennett, E. R.; Nadeau, C.; Tuerk, A.; Paul, L. et al.; Reda, T.; Li, Y.; Buchman, A. S.; Greenberg, D. S.; Seitz, A.; Bennett, D. A.; Giavalisco, P.; Soreq, H.: Alzheimer's brains show inter-related changes in RNA and lipid metabolism. Neurobiology of Disease 106, S. 1 - 13 (2017)

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23.

Zeitschriftenartikel

Bozek, K.; Khrameeva, E. E.; Reznick, J.; Omerbašić, D.; Bennett, N. C.; Lewin, G. R.; Azpurua, J.; Gorbunova, V.; Seluanov, A.; Regnard, P. et al.; Wanert, F.; Marchal, J.; Pifferi, F.; Aujard, F.; Liu, Z.; Shi, P.; Pääbo, S.; Schröder, F.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Lipidome determinants of maximal lifespan in mammals. Scientific Reports 7, 5 (2017)

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24.

Zeitschriftenartikel

Hanhart, P.; Thiess, M.; Amari, K.; Bajdzienko, K.; Giavalisco, P.; Heinlein, M.; Kehr, J.: Bioinformatic and expression analysis of the Brassica napus L. cyclophilins. Scientific Reports 7, 1514 (2017)

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25.

Zeitschriftenartikel

Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Brus, H.; Steup, M.; Herrmann, M.; Steinhauser, D.; Giavalisco, P.: Dynamics of lipids and metabolites during the cell cycle of Chlamydomonas reinhardtii. The Plant Journal 92 (2), S. 331 - 343 (2017)

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26.

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Li, Q.; Bozek, K.; Xu, C.; Guo, Y.; Sun, J.; Pääbo, S.; Sherwood, C. C.; Hof, P. R.; Ely, J. J.; Li, Y. et al.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Changes in lipidome composition during brain development in humans, chimpanzees, and macaque monkeys. Molecular Biology and Evolution 34 (5), S. 1155 - 1166 (2017)

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27.

Zeitschriftenartikel

Salem, M.A.; Li, Y.; Wiszniewski, A.A.G.; Giavalisco, P.: Regulatory-associated protein of TOR (RAPTOR) alters the hormonal and metabolic composition of Arabidopsis seeds, controlling seed morphology, viability and germination potential. The Plant Journal 92 (4), S. 525 - 545 (2017)

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28.

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Swiadek, M.; Proost, S.; Sieh, D.; Yu, J.; Todesco, M.; Jorzig, C.; Cubillos, A.; Plötner, B.; Nikoloski, Z.; Chae, E. et al.; Giavalisco, P.; Fischer, A.; Schröder, F.; Kim, S.-T.; Weigel, D.; Laitinen, R.: Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana. New Phytologist 213 (2), S. 900 - 915 (2017)

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29.

Zeitschriftenartikel

Liu, Z.; Omranian, N.; Neumetzler, L.; Wang, T.; Herter, T.; Usadel, B.; Demura, T.; Giavalisco, P.; Nikoloski, Z.; Persson, S.: A transcriptional and metabolic framework for secondary wall formation in arabidopsis. Plant Physiology 172 (2), S. 1334 - 1351 (2016)

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30.

Zeitschriftenartikel

Ostendorp, A.; Pahlow, S.; Krüßel, L.; Hanhart, P.; Garbe, M. Y.; Deke, J.; Giavalisco, P.; Kehr, J.: Functional analysis of Brassica napus phloem protein and ribonucleoprotein complexes. New Phytologist 214 (3), S. 1188 - 1197 (2016)

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31.

Zeitschriftenartikel

Salem, M.A.; Jueppner, J.; Bajdzienko, K.; Giavalisco, P.: Protocol: A fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and cell wall polymers from a single sample. Plant Methods 12 (1), 45 (2016)

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32.

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Sharma, D. K.; Gautam, K.; Jueppner, J.; Giavalisco, P.; Rihko-Struckmann, L.; Pareek, A.; Sundmacher, K.: UPLC-MS analysis of Chlamydomonas reinhardtii and Scenedesmus obliquus lipid extracts and their possible metabolic roles. Journal of applied phycology 27 (3), S. 1149 - 1159 (2015)

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33.

Zeitschriftenartikel

Kleessen, S.; Irgang, S.; Klie, S.; Giavalisco, P.; Nikoloski, Z.: Integration of transcriptomics and metabolomics data specifies the metabolic response of Chlamydomonas to rapamycin treatment. The Plant Journal 81 (5), S. 822 - 835 (2015)

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Alseekh, S.; Tohge, T.; Wendenburg, R.; Scossa, F.; Omranian, N.; Li, J.; Kleessen, S.; Giavalisco, P.; Pleban, T.; Mueller-Roeber, B. et al.; Zamir, D.; Nikoloski, Z.; Fernie, A. R.: Identification and mode of inheritance of quantitative trait Loci for secondary metabolite abundance in tomato. The Plant Cell 27 (3), S. 485 - 512 (2015)

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35.

Zeitschriftenartikel

Avin-Wittenberg, T.; Bajdzienko, K.; Wittenberg, G.; Alseekh, S.; Tohge, T.; Bock, R.; Giavalisco, P.; Fernie, A. R.: Global Analysis of the Role of Autophagy in Cellular Metabolism and Energy Homeostasis in Arabidopsis Seedlings under Carbon Starvation. The Plant Cell 27 (2), S. 306 - 322 (2015)

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36.

Zeitschriftenartikel

Bozek, K.; Wei, Y.; Yan, Z.; Liu, X.; Xiong, J.; Sugimoto, M.; Tomita, M.; Paeaebo, S.; Sherwood, C. C.; Hof, P. R. et al.; Ely, J. J.; Li, Y.; Steinhauser, D.; Willmitzer, L.; Giavalisco, P.; Khaitovich, P.: Organization and Evolution of Brain Lipidome Revealed by Large-Scale Analysis of Human, Chimpanzee, Macaque, and Mouse Tissues. Neuron 85 (4), S. 695 - 702 (2015)

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Bromke, M. A.; Hochmuth, A.; Tohge, T.; Fernie, A. R.; Giavalisco, P.; Burgos, A.; Willmitzer, L.; Brotman, Y.: Liquid chromatography high-resolution mass spectrometry for fatty acid profiling. The Plant Journal 81 (3), S. 529 - 536 (2015)

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38.

Zeitschriftenartikel

Li, N.; Gügel, I. L.; Giavalisco, P.; Zeisler, V.; Schreiber, L.; Soll, J.; Philippar, K.: FAX1, a Novel Membrane Protein Mediating Plastid Fatty Acid Export. PLoS Biology 13 (2), e1002053 (2015)

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39.

Zeitschriftenartikel

Vallarino, J. G.; Osorio, S.; Bombarely, A.; Casanal, A.; Cruz-Rus, E.; Sanchez-Sevilla, J. F.; Amaya, I.; Giavalisco, P.; Fernie, A. R.; Botella, M. A. et al.; Valpuesta, V.: Central role of FaGAMYB in the transition of the strawberry receptacle from development to ripening. The New Phytologist 208 (2), S. 482 - 496 (2015)

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40.

Zeitschriftenartikel

Hauck, O. K.; Scharnberg, J.; Escobar, N. M.; Wanner, G.; Giavalisco, P.; Witte, C.-P.: Uric Acid Accumulation in an Arabidopsis Urate Oxidase Mutant Impairs Seedling Establishment by Blocking Peroxisome Maintenance. Plant Cell 26 (7), S. 3090 - 3100 (2014)

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Khrameeva, E. E.; Bozek, K.; He, L.; Yan, Z.; Jiang, X.; Wei, Y.; Tang, K.; Gelfand, M. S.; Prüfer, K.; Kelso, J. F. et al.; Pääbo, S.; Giavalisco, P.; Lachmann, M.; Khaitovich, P.: Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans. Nature Communications 5, 3584 (2014)

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42.

Zeitschriftenartikel

Bozek, K.; Wei, Y.; Yan, Z.; Liu, X.; Xiong, J.; Sugimoto, M.; Tomita, M.; Paeaebo, S.; Pieszek, R.; Sherwood, C. C. et al.; Hof, P. R.; Ely, J. J.; Steinhauser, D.; Willmitzer, L.; Bangsbo, J.; Hansson, O.; Call, J.; Giavalisco, P.; Khaitovich, P.: Exceptional Evolutionary Divergence of Human Muscle and Brain Metabolomes Parallels Human Cognitive and Physical Uniqueness. PLoS Biology 12 (5), e1001871 (2014)

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43.

Zeitschriftenartikel

Delgado, R.; Munoz, Y.; Pena-Cortes, H.; Giavalisco, P.; Bacigalupo, J.: Diacylglycerol Activates the Light-Dependent Channel TRP in the Photosensitive Microvilli of Drosophila melanogaster Photoreceptors. The Journal of Neuroscience 34 (19), S. 6679 - 6686 (2014)

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Hemme, D.; Veyel, D.; Mühlhaus, T.; Sommer, F.; Jueppner, J.; Unger, A.-K.; Sandmann, M.; Fehrle, I.; Schönfelder, S.; Steup, M. et al.; Geimer, S.; Kopka, J.; Giavalisco, P.; Schroda, M.: Systems-Wide Analysis of Acclimation Responses to Long-Term Heat Stress and Recovery in the Photosynthetic Model Organism Chlamydomonas reinhardtii. The Plant Cell 26 (11), S. 4270 - 4297 (2014)

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45.

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Klein, O.; Strohschein, K.; Nebrich, G.; Oetjen, J.; Trede, D.; Thiele, H.; Alexandrov, T.; Giavalisco, P.; Duda, G. N.; von Roth, P. et al.; Geissler, S.; Klose, J.; Winkler, T.: MALDI imaging mass spectrometry: Discrimination of pathophysiological regions in traumatized skeletal muscle by characteristic peptide signatures. Proteomics 14 (20), S. 2249 - 2260 (2014)

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Kuppusamy, T.; Giavalisco, P.; Arvidsson, S.; Sulpice, R.; Stitt, M.; Finnegan, P. M.; Scheible, W.-R.; Lambers, H.; Jost, R.: Lipid Biosynthesis and Protein Concentration Respond Uniquely to Phosphate Supply during Leaf Development in Highly Phosphorus-Efficient Hakea prostrata. Plant Physiology 166 (4), S. 1891 - 911 (2014)

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47.

Zeitschriftenartikel

Schroeder, F.; Lisso, J.; Obata, T.; Erban, A.; Maximova, E.; Giavalisco, P.; Kopka, J.; Fernie, A. R.; Willmitzer, L.; Muessig, C.: Consequences of induced brassinosteroid deficiency in Arabidopsis leaves. BMC Plant Biology 14, 309 (2014)

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48.

Zeitschriftenartikel

Wulff-Zottele, C.; Hesse, H.; Fisahn, J.; Bromke, M. A.; Vera-Villalobos, H.; Li, Y.; Frenzel, F.; Giavalisco, P.; Ribera-Fonseca, A.; Zunino, L. et al.; Caruso, I.; Stohmann, E.; de la Luz Mora, M.: Sulphate fertilization ameliorates long-term aluminum toxicity symptoms in perennial ryegrass (Lolium perenne). Plant Physiology and Biochemistry 83, S. 88 - 99 (2014)

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49.

Zeitschriftenartikel

Yadav, U. P.; Ivakov, A.; Feil, R.; Duan, G. Y.; Walther, D.; Giavalisco, P.; Piques, M.; Carillo , P.; Hubberten, H. M.; Stitt, M. et al.; Lunn, J. E.: The sucrose–trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P. Journal of Experimental Botany 65 (4), S. 1051 - 1068 (2014)

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Zeitschriftenartikel

Trost, G.; Vi, S. L.; Czesnick, H.; Lange, P.; Holton, N.; Giavalisco, P.; Zipfel, C.; Kappel, C.; Lenhard, M.: Arabidopsis poly(A) polymerase PAPS1 limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4. The Plant Journal 77 (5), S. 688 - 699 (2013)

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Publikationen von Patrick Giavalisco

Zeitschriftenartikel (91)