All Publications

Journal Article (2306)

  1. 1.
    Alhajturki, D.; Muralidharan, S.; Nurmi, M.; Rowan, B. A.; Lunn, J. E.; Boldt, H.; Salem, M.A.; Alseekh, S.; Jorzig, C.; Feil, R. et al.; Giavalisco, P.; Fernie, A. R.; Weigel, D.; Laitinen, R.: Dose-dependent interactions between two loci trigger altered shoot growth in BG-5 × Krotzenburg-0 (Kro-0) hybrids of Arabidopsis thaliana. New Phytologist 217 (1), pp. 392 - 406 (2018)
  2. 2.
    Borghi, M.; Xie, D.-Y.: Cloning and characterization of a monoterpene synthase gene from flowers of Camelina sativa. Planta 247 (2), pp. 443 - 457 (2018)
  3. 3.
    Casartelli, A.; Riewe, D.; Hubberten, H. M.; Altmann, T.; Hoefgen, R.; Heuer, S.: Exploring traditional aus-type rice for metabolites conferring drought tolerance. Rice 11 (1), 9 (2018)
  4. 4.
    Claassens, N. J.; Sánchez-Andrea, I.; Sousa, D.Z.; Bar-Even, A.: Towards sustainable feedstocks: A guide to electron donors for microbial carbon fixation. Current Opinion in Biotechnology 50, pp. 195 - 205 (2018)
  5. 5.
    Cotton, C. A. R.; Edlich-Muth, C.; Bar-Even, A.: Reinforcing carbon fixation: CO2 reduction replacing and supporting carboxylation. Current Opinion in Biotechnology 49 (Supplement C), pp. 49 - 56 (2018)
  6. 6.
    Del-Saz, N. F.; Ribas-Carbo, M.; McDonald, A. E.; Lambers, H.; Fernie, A. R.; Florez-Sarasa, I. D.: An In Vivo Perspective of the Role(s) of the Alternative Oxidase Pathway. Trends in Plant Science 23 (3), pp. 206 - 219 (2018)
  7. 7.
    Del-Saz, N. F.; Ribas-Carbo, M.; McDonald, A. E.; Lambers, H.; Fernie, A. R.; Florez-Sarasa, I. D.: An In Vivo Perspective of the Role(s) of the Alternative Oxidase Pathway. Trends in Plant Science 23 (3), pp. 206 - 219 (2018)
  8. 8.
    Dickinson, P. J.; Kumar, M.; Martinho, C.; Yoo, S. J.; Lan, H.; Artavanis, G.; Charoensawan, V.; Schöttler, M. A.; Bock, R.; Jaeger, K. E. et al.; Wigge, P. A.: Chloroplast Signaling Gates Thermotolerance in Arabidopsis. Cell Reports 22 (7), pp. 1657 - 1665 (2018)
  9. 9.
    Fuentes, P.; Armarego-Marriott, T.; Bock, R.: Plastid transformation and its application in metabolic engineering. Current Opinion in Biotechnology 49, pp. 10 - 15 (2018)
  10. 10.
    Hansen, B. O.; Meyer, E. H.; Ferrari, C.; Vaid, N.; Movahedi, S.; Vandepoele, K.; Nikoloski, Z.; Mutwil, M.: Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana. New Phytologist 217 (4), pp. 1521 - 1534 (2018)
  11. 11.
    Jueppner, J.; Mubeen, U.; Leisse, A.; Caldana, C.; Wiszniewski, A.A.G.; Steinhauser, D.; Giavalisco, P.: The target of rapamycin kinase affects biomass accumulation and cell cycle progression by altering carbon/nitrogen balance in synchronized Chlamydomonas reinhardtii cells. The Plant Journal 93 (2), pp. 355 - 376 (2018)
  12. 12.
    Kehr, J.; Kragler, F.: Long distance RNA movement. New Phytologist 218 (1), pp. 29 - 40 (2018)
  13. 13.
    Lang, D.; Ullrich, K.K.; Murat, F.; Fuchs, J.; Jenkins, J.; Haas, F.B.; Piednoel, M.; Gundlach, H.; Van Bel, M.; Meyberg, R. et al.; Vives, C.; Morata, J.; Symeonidi, A.; Hiss, M.; Muchero, W.; Kamisugi, Y.; Saleh, O.; Blanc, G.; Decker, E.L.; van Gessel, N.; Grimwood, J.; Hayes, R.D.; Graham, S.W.; Gunter, L.E.; McDaniel, S.F.; Hoernstein, S.N.W.; Larsson, A.; Li, F.-W.; Perroud, P.-F.; Phillips, J.; Ranjan, P.; Rokshar, D.S.; Rothfels, C.J.; Schneider, L.; Shu, S.; Stevenson, D.W.; Thümmler, F.; Tillich, M.; Villarreal Aguilar, J.C.; Widiez, T.; Wong, G.K.-S.; Wymore, A.; Zhang, Y.; Zimmer, A.D.; Quatrano, R.S.; Mayer, K.F.X.; Goodstein, D.; Casacuberta, J.M.; Vandepoele, K.; Reski, R.; Cuming, A.C.; Tuskan, G.A.; Maumus, F.; Salse, J.; Schmutz, J.; Rensing, S.A.: The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal 93 (3), pp. 515 - 533 (2018)
  14. 14.
    Meyer, E. H.; Lehmann, C.; Boivin, S.; Brings, L.; De Cauwer, I.; Bock, R.; Kühn, K.; Touzet, P.: CMS-G from Beta vulgaris ssp. maritima is maintained in natural populations despite containing an atypical cytochrome c oxidase. Biochemical Journal 475 (4), pp. 759 - 773 (2018)
  15. 15.
    Moreno, J.C.; Martinez-Jaime, S.; Schwartzmann, J.; Karcher, D.; Tillich, M.; Graf, A.; Bock, R.: Temporal Proteomics of Inducible RNAi Lines of Clp Protease Subunits Identifies Putative Protease Substrates. PLANT PHYSIOLOGY 176 (2), pp. 1485 - 1508 (2018)
  16. 16.
    Nietzsche, M.; Guerra, T.; Alseekh, S.; Wiermer, M.; Sonnewald, S.; Fernie, A. R.; Börnkea, F.: STOREKEEPER RELATED1/G-element binding protein (STKR1) interacts with protein kinase SnRK1. Plant Physiology 176 (2), pp. 1773 - 1792 (2018)
  17. 17.
    Rosa-Tellez, S.; Djoro Anoman, A.; Flores-Tornero, M.; Toujani, W.; Alseekh, S.; Fernie, A. R.; Nebauer, S. G.; Munoz-Bertomeu, J.; Segura, J.; Ros, R.: Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth. Plant Physiology 176 (2), pp. 1182 - 1198 (2018)
  18. 18.
    Sanchez-Rodriguez, C.; Shi, Y.; Kesten, C.; Zhang, D.; Sancho-Andres, G.; Ivakov, A.; Lampugnani, E. R.; Sklodowski, K.; Fujimoto, M.; Nakano, A. et al.; Bacic, A.; Wallace, I. S.; Ueda, T.; Van Damme, D.; Zhou, Y.; Persson, S.: The Cellulose Synthases Are Cargo of the TPLATE Adaptor Complex. Molecular Plant 11 (2), pp. 346 - 349 (2018)
  19. 19.
    Schwachtje, J.; Fischer, A.; Erban, A.; Kopka, J.: Primed primary metabolism in systemic leaves: a functional systems analysis. Scientific Reports 8, 216 (2018)
  20. 20.
    Seaton, D. D.; Graf, A.; Baerenfaller, K.; Stitt, M.; Millar, A. J.; Gruissem, W.: Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism. Molecular Systems Biology 14 (3), e7962 (2018)
  21. 21.
    Skeffington, A. W.; Scheffel, A.: Exploiting algal mineralization for nanotechnology: bringing coccoliths to the fore. Current Opinion in Biotechnology 49 (Supplement C), pp. 57 - 63 (2018)
  22. 22.
    Sonnewald, U.; Fernie, A. R.: Next-generation strategies for understanding and influencing source–sink relations in crop plants. Current Opinion in Plant Biology 43, pp. 63 - 70 (2018)
  23. 23.
    Stoessel, D.; Schulte, C.; Teixeira dos Santos, M. C.; Scheller, D.; Rebollo-Mesa, I.; Deuschle, C.; Walther, D.; Schauer, N.; Berg, D.; Nogueira da Costa, A. et al.; Maetzler, W.: Promising Metabolite Profiles in the Plasma and CSF of Early Clinical Parkinson's Disease. Frontiers in Aging Neuroscience 10, 51 (2018)
  24. 24.
    Thirumalaikumar, V. P.; Devkar, V.; Mehterov, N.; Ali, S.; Ozgur, R.; Turkan, I.; Mueller-Roeber, B.; Balazadeh, S.: NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato. Plant Biotechnology Journal 16 (2), pp. 354 - 366 (2018)
  25. 25.
    Timm, S.; Giese, J.; Engel, N.; Wittmiß, M.; Florian, A.; Fernie, A. R.; Bauwe, H.: T-protein is present in large excess over the other proteins of the glycine cleavage system in leaves of Arabidopsis. Planta 247 (1), pp. 41 - 51 (2018)
  26. 26.
    Verbančič, J.; Lunn, J. E.; Stitt, M.; Persson, S.: Carbon Supply and the Regulation of Cell Wall Synthesis. Molecular Plant 11 (1), pp. 75 - 94 (2018)
  27. 27.
    Wen, W.; Jin, M.; Li, K.; Liu, H.; Xiao, Y.; Zhao, M.; Alseekh, S.; Li, W.; de Abreu e Lima, F.; Brotman, Y. et al.; Willmitzer, L.; Fernie, A. R.; Yan, J.: An integrated multi-layered analysis of the metabolic networks of different tissues uncovers key genetic components of primary metabolism in maize. The Plant Journal 93 (6), pp. 1116 - 1128 (2018)
  28. 28.
    Whitcomb, S. J.; Nguyen, H. C.; Brückner, F.; Hesse, H.; Hoefgen, R.: CYSTATHIONINE GAMMA-SYNTHASE activity in rice is developmentally regulated and strongly correlated with sulfate. Plant Science 270, pp. 234 - 244 (2018)
  29. 29.
    Wu, S.; Tohge, T.; Cuadros-Inostroza, A. C.; Tong, H.; Tenenboim, H.; Kooke, R.; Méret, M.; Keurentjes, J. B.; Nikoloski, Z.; Fernie, A. R. et al.; Willmitzer, L.; Brotman, Y.: Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions. Molecular Plant 11 (1), pp. 118 - 134 (2018)
  30. 30.
    Zhu, G.; Wang, S.; Huang, Z.; Zhang, S.; Liao, Q.; Zhang, C.; Lin, T.; Qin, M.; Peng, M.; Yang, C. et al.; Cao, X.; Han, X.; Wang, X.; van der Knaap, E.; Zhang, Z.; Cui, X.; Klee, H.; Fernie, A. R.; Luo, J.; Huang, S.: Rewiring of the Fruit Metabolome in Tomato Breeding. Cell 172 (1), pp. 249 - 261.e12 (2018)
  31. 31.
    de Oliveira Silva, F. M.; Lichtenstein, G.; Alseekh, S.; Rosado-Souza, L.; Conte, M.; Suguiyama, V. F.; Lira, B. S.; Fanourakis, D.; Usadel, B.; Bhering, L. L. et al.; DaMatta, F. M.; Sulpice, R.; Araújo, W. L.; Rossi, M.; de Setta, N.; Fernie, A. R.; Carrari, F.; Nunes-Nesi, A.: The genetic architecture of photosynthesis and plant growth-related traits in tomato. Plant, Cell and Environment 41 (2), pp. 327 - 341 (2018)
  32. 32.
    van Oort, B.; Roy, L. M.; Xu, P.; Lu, Y.; Karcher, D.; Bock, R.; Croce, R.: Revisiting the Role of Xanthophylls in Nonphotochemical Quenching. The Journal of Physical Chemistry Letters 9 (2), pp. 346 - 352 (2018)
  33. 33.
    Allu, A. D.; Simancas, B.; Balazadeh, S.; Munne-Bosch, S.: Defense-Related Transcriptional Reprogramming in Vitamin E-Deficient Arabidopsis Mutants Exposed to Contrasting Phosphate Availability. Frontiers in Plant Science 8, 1396 (2017)
  34. 34.
    Alseekh, S.; Tong, H. (Mathematical Modelling and Systems Biology - Nikoloski, Cooperative Research Groups, Max Planck Institute of Molecular Plant Physiology, Max Planck Society), H.; Scossa, F.; Brotman, Y.; Vigroux, F.; Tohge, T.; Ofner, I.; Zamir, D.; Nikoloski, Z.; Fernie, A. R.: Canalization of Tomato Fruit Metabolism. Plant Cell 29 (11), pp. 2753 - 2765 (2017)
  35. 35.
    Andersen, U. B.; Kjaer, K. H.; Erban, A.; Alpers, J.; Hincha, D. K.; Kopka, J.; Zuther, E.; Pagter, M.: Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environmental and Experimental Botany 140, pp. 96 - 109 (2017)
  36. 36.
    Annunziata, M. G.; Ciarmiello, L.; Woodrow, P.; Maximova, E.; Fuggi, A.; Carillo, P.: Durum wheat roots adapt to salinity remodelling the cellular content of nitrogen metabolites and sucrose. Frontiers in Plant Science 7, 2035 (2017)
  37. 37.
    Annunziata, M. G.; Apelt, F.; Carillo, P.; Krause, U.; Feil, R.; Mengin, V.; Lauxmann, M.; Koehl, K. I.; Nikoloski, Z.; Stitt, M. et al.; Lunn, J. E.; Raines, C.: Getting back to nature: a reality check for experiments in controlled environments. Journal of Experimental Botany 68 (16), pp. 4463 - 4477 (2017)
  38. 38.
    Apelt, F.; Breuer, D.; Olas, J. J.; Annunziata, M. G.; Flis, A.; Nikoloski, Z.; Kragler, F.; Stitt, M.: Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement. Plant Physiology 174 (3), pp. 1949 - 1968 (2017)
  39. 39.
    Armbruster, U.; Correa Galvis, V.; Kunz, H.-H.; Strand, D.: The regulation of the chloroplast proton motive force plays a key role for photosynthesis in fluctuating light. Current Opinion in Plant Biology 37, pp. 56 - 62 (2017)
  40. 40.
    Arrivault, S.; Obata, T.; Szecówka, M.; Mengin, V.; Guenther, M.; Höhne, M.; Fernie, A. R.; Stitt, M.: Metabolite pools and carbon flow during C4 photosynthesis in maize: 13CO2 labeling kinetics and cell type fractionation. Journal of Experimental Botany 68, pp. 283 - 298 (2017)
  41. 41.
    Aslan, S.; Noor, E.; Bar-Even, A.: Holistic bioengineering: Rewiring central metabolism for enhanced bioproduction. Biochemical Journal 474 (23), pp. 3935 - 3950 (2017)
  42. 42.
    Barbash, S.; Garfinkel, B. P.; Maoz, R.; Simchovitz, A.; Nadorp, B.; Guffanti, A.; Bennett, E. R.; Nadeau, C.; Tuerk, A.; Paul, L. et al.; Reda, T.; Li, Y.; Buchman, A. S.; Greenberg, D. S.; Seitz, A.; Bennett, D. A.; Giavalisco, P.; Soreq, H.: Alzheimer's brains show inter-related changes in RNA and lipid metabolism. Neurobiology of Disease 106, pp. 1 - 13 (2017)
  43. 43.
    Bareither, N.; Scheffel, A.; Metz, J.: Distribution of polyploid plants in the common annual Brachypodium distachyon (s.l.) in Israel is not linearly correlated with aridity. Israel Journal of Plant Sciences (2017)
  44. 44.
    Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Autophagy Deficiency Compromises Alternative Pathways of Respiration following Energy Deprivation in Arabidopsis thaliana. Plant Physiology 175 (1), pp. 62 - 76 (2017)
  45. 45.
    Barros, J. A. S.; Cavalcanti, J. H. F.; Medeiros, D. B.; Nunes-Nesi, A.; Avin-Wittenberg, T.; Fernie, A. R.; Araujo, W. L.: Commonalities and differences in plants deficient in autophagy and alternative pathways of respiration on response to extended darkness. Plant Signaling & Behavior 12 (11), e1377877 (2017)
  46. 46.
    Bayer-Császár, E.; Haag, S.; Jörg, A.; Glass, F.; Härtel, B.; Obata, T.; Meyer, E. H.; Brennicke, A.; Takenaka, M.: The conserved domain in MORF proteins has distinct affinities to the PPR and E elements in PPR RNA editing factors. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860 (8), pp. 813 - 828 (2017)
  47. 47.
    Becker, S.; Scheffel, A.; Polz, M. F.; Hehemann, J.-H.: Accurate quantification of laminarin in marine organic matter with enzymes from marine microbes. Applied and Environmental Microbiology 89 (9), e03389 (2017)
  48. 48.
    Bledsoe, S. W.; Henry, C.; Griffiths, C. A.; Paul, M. J.; Feil, R.; Lunn, J. E.; Stitt, M.; Lagrimini, L. M.: The role of Tre6P and SnRK1 in maize early kernel development and events leading to stress-induced kernel abortion. BMC Plant Biology (2017)
  49. 49.
    Bolt, S.; Zuther, E.; Zintl, S.; Hincha, D. K.; Schmülling, T.: ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation. Plant, Cell and Environment 40 (1), pp. 108 - 120 (2017)
  50. 50.
    Borghi, M.; Fernie, A. R.; Schiestl, F. P.; Bouwmeester, H. J.: The Sexual Advantage of Looking, Smelling, and Tasting Good: The Metabolic Network that Produces Signals for Pollinators. Trends in Plant Science (2017)
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