Publications of the Group

John, S.; Apelt, F.; Kumar, A.; Acosta, I.; Bents, D.; Annunziata, M. G.; Fichtner, F.; Gutjahr, C.; Mueller-Roeber, B.; Olas, J. J.: The Transcription factor HSFA7b controls thermomemory at the shoot apical meristem by regulating ethylene biosynthesis and signaling in Arabidopsis. Plant Communications 5 (3), 100743 (2024)

Buelbuel, S.; Sakuraba, Y.; Sedaghatmehr, M.; Watanabe, M.; Hoefgen, R.; Balazadeh, S.; Mueller-Roeber, B.: Arabidopsis BBX14 negatively regulates nitrogen starvation- and dark-induced leaf senescence. The Plant Journal 116 (1), pp. 251 - 268 (2023)

Dong, Y.; Gupta, S.; Wargent, J.J.; Putterill, J.; Macknight, R.C.; Gechev, T.S.; Mueller-Roeber, B.; Dijkwel, P.P.: Comparative Transcriptomics of Multi-Stress Responses in Pachycladon cheesemanii and Arabidopsis thaliana. International Journal of Molecular Sciences 24 (14), 11323 (2023)

Zhao, L.; Wang, H.-J.; Martins, P. D.; van Dongen; T., J.; Bolger, A. M.; Schmidt, R. R.; Jing, H.-C.; Mueller-Roeber, B.; Schippers, J. H. M.: The Arabidopsis thaliana onset of leaf death 12 mutation in the lectin receptor kinase P2K2 results in an autoimmune phenotype. BMC Plant Biology 23 (1), 294 (2023)

Machens, F.; Ran, G.; Ruehmkorff, C.; Meyer auf der Heyde, J.; Mueller-Roeber, B.; Hochrein, L.: PhiReX 2.0: A Programmable and Red Light-Regulated CRISPR-dCas9 System for the Activation of Endogenous Genes in Saccharomyces cerevisiae. ACS Synthetic Biology 12 (4), pp. 1046 - 1057 (2023)

Fan, R.; Zhu, C.; Qiu, D.; Mao, G.; Mueller-Roeber, B.; Zeng, J.: Integrated transcriptomic and metabolomic analyses reveal key genes controlling flavonoid biosynthesis in Citrus grandis ‘Tomentosa’ fruits. Plant Physiology and Biochemistry 196, pp. 210 - 221 (2023)

Sedaghatmehr, M.; Stüwe, B.; Mueller-Roeber, B.; Balazadeh, S.: Heat shock factor HSFA2 fine-tunes resetting of thermomemory via plastidic metalloprotease FtsH6. Journal of Experimental Botany 73 (18), pp. 6394 - 6404 (2022)

Alshareef, N. O.; Otterbach, S. L.; Allu, A. D.; Woo, Y. H.; de Werk, T.; Kamranfar, I.; Mueller-Roeber, B.; Tester, M.; Balazadeh, S.; Schmöckel, S. M.: NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. Scientific Reports 12, 11264 (2022)

Ralevski, A.; Apelt, F.; Olas, J.; Mueller-Roeber, B.; Rugarli, E.; Kragler, F.; Horvath, T.: Plant mitochondrial FMT and its mammalian homolog CLUH controls development and behavior in Arabidopsis and locomotion in mice. Cellular and Molecular Life Sciences 79 (6), 334 (2022)

Tabatabaei, I.; Alseekh, S.; Shahid, M.; Leniak, E.; Wagner, M.; Mahmoudi, H.; Thushar, S.; Fernie, A. R.; Murphy, K. M.; Schmöckel, S. M. et al.; Tester, M.; Mueller-Roeber, B.; Skirycz, A.; Balazadeh, S.: The diversity of quinoa morphological traits and seed metabolic composition. Scientific Data 9 (1), 323 (2022)

Olas, J. J.; Apelt, F.; Annunziata, M. G.; John, S.; Richard, S. I.; Gupta, S.; Kragler, F.; Balazadeh, S.; Mueller-Roeber, B.: Primary carbohydrate metabolism genes participate in heat stress memory at the shoot apical meristem of Arabidopsis thaliana. Molecular Plant 14 (9), pp. 1508 - 1524 (2021)

Sedaghatmehr, M.; Thirumalaikumar, V. P.; Kamranfar, I.; Schulz, K.; Mueller-Roeber, B.; Sampathkumar, A.; Balazadeh, S.: Autophagy complements metalloprotease FtsH6 in degrading plastid heat shock protein HSP21 during heat stress recovery. Journal of Experimental Botany 72 (21), pp. 7498 - 7513 (2021)

Devkar, V.; Thirumalaikumar, V. P.; Xue, G.-P.; Vallarino, J. G.; Turečková, V.; Strnad, M.; Fernie, A. R.; Hoefgen, R.; Mueller-Roeber, B.; Balazadeh, S.: Multifaceted regulatory function of tomato SlTAF1 in the response to salinity stress. New Phytologist 225 (4), pp. 1681 - 1698 (2020)

Moreno Curtidor, C.; Annunziata, M. G.; Gupta, S.; Apelt, F.; Richard, S. I.; Kragler, F.; Mueller-Roeber, B.; Olas, J. J.: Physiological Profiling of Embryos and Dormant Seeds in Two Arabidopsis Accessions Reveals a Metabolic Switch in Carbon Reserve Accumulation. Frontiers in Plant Science 11, 588433 (2020)

Omidbakhshfard, M. A.; Sujeeth, N.; Gupta, S.; Omranian, N.; Guinan, K.J.; Brotman, Y.; Nikoloski, Z.; Fernie, A. R.; Mueller-Roeber, B.; Gechev, T.S.: A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress. International Journal of Molecular Sciences 21 (2), 474 (2020)

Sujeeth, N.; Mehterov, N.; Gupta, S.; Qureshi, M. K.; Fischer, A.; Proost, S.; Omidbakhshfard, M. A.; Obata, T.; Benina, M.; Staykov, N. et al.; Balazadeh, S.; Walther, D.; Fernie, A. R.; Mueller-Roeber, B.; Hille, J.; Gechev, T. S.: A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana. Cellular and Molecular Life Sciences 77, pp. 705 - 718 (2020)

Dong, Y.; Gupta, S.; Sievers, R.; Wargent, J.J.; Wheeler, D.; Putterill, J.; Macknight, R.; Gechev, T.; Mueller-Roeber, B.; Dijkwel, P.P.: Genome draft of the Arabidopsis relative Pachycladon cheesemanii reveals novel strategies to tolerate New Zealand's high ultraviolet B radiation environment. BMC Genomics 20 (1), 838 (2019)

Gupta, S.; Dong, Y.; Dijkwel, P. P.; Mueller-Roeber, B.; Gechev, T. S.: Genome-Wide Analysis of ROS Antioxidant Genes in Resurrection Species Suggest an Involvement of Distinct ROS Detoxification Systems during Desiccation. International Journal of Molecular Sciences 20 (12), 3101 (2019)

Awais, M.; Ahmad, R.; Khan, N.; Garapati, P.; Shahzad, M.; Afroz, A.; Rashid, U.; Khan, S.A.: Transformation of tomato variety rio grande with drought resistant transcription factor gene ATAF1 and its molecular analysis. Pakistan Journal of Botany 50 (5), pp. 1811 - 1820 (2018)

Hochrein, L.; Mitchell, L. A.; Schulz, K.; Messerschmidt, K.; Mueller-Roeber, B.: L-SCRaMbLE as a tool for light-controlled Cre-mediated recombination in yeast. Nature Communications 9 (1), 1931 (2018)

Kamranfar, I.; Xue, G.-P.; Tohge, T.; Sedaghatmehr, M.; Fernie, A. R.; Balazadeh, S.; Mueller-Roeber, B.: Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence. New Phytologist 218 (4), pp. 1543 - 1557 (2018)

Ma, X.; Zhang, Y.; Tureckova, V.; Xue, G.-P.; Fernie, A. R.; Mueller-Roeber, B.; Balazadeh, S.: The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato. Plant Physiology 177 (3), pp. 1286 - 1302 (2018)

Omidbakhshfard, M. A.; Fujikura, U.; Olas, J. J.; Xue, G.-P.; Balazadeh, S.; Mueller-Roeber, B.: GROWTH-REGULATING FACTOR 9 negatively regulates arabidopsis leaf growth by controlling ORG3 and restricting cell proliferation in leaf primordia. PLoS Genetics 14 (7), e1007484 (2018)

Thirumalaikumar, V. P.; Devkar, V.; Mehterov, N.; Ali, S.; Ozgur, R.; Turkan, I.; Mueller-Roeber, B.; Balazadeh, S.: NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato. Plant Biotechnology Journal 16 (2), pp. 354 - 366 (2018)

Ebrahimian-Motlagh, S.; Ribone, P. A.; Thirumalaikumar, V. P.; Allu, A. D.; Chan, R. L.; Mueller-Roeber, B.; Balazadeh, S.: JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Frontiers in Plant Science 8, 2118 (2017)

Hochrein, L.; Machens, F.; Gremmels, J.; Schulz, K.; Messerschmidt, K.; Mueller-Roeber, B.: AssemblX: a user-friendly toolkit for rapid and reliable multi-gene assemblies. Nucleic Acids Research 45 (10), e80 (2017)

Hochrein, L.; Machens, F.; Messerschmidt, K.; Mueller-Roeber, B.: PhiReX: a programmable and red light-regulated protein expression switch for yeast. Nucleic Acids Research 45 (15), pp. 9193 - 9205 (2017)

Naseri, G.; Balazadeh, S.; Machens, F.; Kamranfar, I.; Messerschmidt, K.; Mueller-Roeber, B.: Plant-Derived Transcription Factors for Orthologous Regulation of Gene Expression in the Yeast Saccharomyces cerevisiae. ACS Synthetic Biology 6 (9), pp. 1742 - 1756 (2017)

Shahnejat-Bushehri, S.; Allu, A. D.; Mehterov, N.; Thirumalaikumar, V. P.; Alseekh, S.; Fernie, A. R.; Mueller-Roeber, B.; Balazadeh, S.: Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Frontiers in Plant Science 8, 214 (2017)

Shubchynskyy, V.; Boniecka, J.; Schweighofer, A.; Simulis, J.; Kvederaviciute, K.; Stumpe, M.; Mauch, F.; Balazadeh, S.; Mueller-Roeber, B.; Boutrot, F. et al.; Zipfel, C.; Meskiene, I.: Protein phosphatase AP2C1 negatively regulates basal resistance and defense responses to Pseudomonas syringae. Journal of Experimental Botany 68 (5), pp. 1169 - 1183 (2017)