Degenkolbe, T.; Giavalisco, P.; Zuther, E.; Seiwert, B.; Hincha, D. K.; Willmitzer, L.: Differential remodeling of the lipidome during cold acclimation in natural accessions of Arabidopsis thaliana. The Plant Journal 72, pp. 972 - 982 (2012)

Lambers, H.; Cawthray, G. R.; Giavalisco, P.; Kuo, J.; Laliberte, E.; Pearse, S. J.; Scheible, W.-R.; Stitt, M.; Teste, F.; Turner, B. L.: Proteaceae from severely phosphorus-impoverished soils extensively replace phospholipids with galactolipids and sulfolipids during leaf development to achieve a high photosynthetic phosphorus-use-efficiency. New Phytologist 196 (4), pp. 1098 - 1108 (2012)

Mastrobuoni, G.; Irgang, S.; Pietzke, M.; Assmus, H. E.; Wenzel, M.; Schulze, W. X.; Kempa, S.: Proteome dynamics and early salt stress response of the photosynthetic organism Chlamydomonas reinhardtii. BMC Genomics 13, p. 215 (2012)

Burgos, A.; Szymanski, J.; Seiwert, B.; Degenkolbe, T.; Hannah, M. A.; Giavalisco, P.; Willmitzer, L.: Analysis of short-term changes in the Arabidopsis thaliana glycerolipidome in response to temperature and light. The Plant Journal 66 (4), pp. 656 - 668 (2011)

Csukasi, F.; Osorio, S.; Gutierrez, J. R.; Kitamura, J.; Giavalisco, P.; Nakajima, M.; Fernie, A. R.; Rathjen, J. P.; Botella, M. A.; Valpuesta, V. et al.; Medina-Escobar, N.: Gibberellin biosynthesis and signalling during development of the strawberry receptacle. New Phytologist 191 (2), pp. 376 - 390 (2011)

Fu, X.; Giavalisco, P.; Liu, X. L.; Catchpole, G.; Fu, N.; Ning, Z. B.; Guo, S.; Yan, Z.; Somel, M.; Paabo, S. et al.; Zeng, R.; Willmitzer, L.; Khaitovich, P.: Rapid metabolic evolution in human prefrontal cortex. Proceedings of the National Academy of Sciences of the United States of America 108 (15), pp. 6181 - 6186 (2011)

Giavalisco, P.; Li, Y.; Matthes, A.; Eckhardt, A.; Hubberten, H.-M.; Hesse, H.; Segu, S.; Hummel, J.; Koehl, K. I.; Willmitzer, L.: Elemental formula annotation of polar and lipophilic metabolites using 13C, 15N and 34S isotope labelling, in combination with high-resolution mass spectrometry. The Plant Journal 68 (2), pp. 364 - 376 (2011)

Huege, J.; Krall, L.; Steinhauser, M.-C.; Giavalisco, P.; Rippka, R.; de Marsac, N. T.; Steinhauser, D.: Sample amount alternatives for data adjustment in comparative cyanobacterial metabolomics. Analytical and Bioanalytical Chemistry 399 (10), pp. 3503 - 3517 (2011)

Hummel, J.; Segu, S.; Li, Y.; Irgang, S.; Jueppner, J.; Giavalisco, P.: Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids. Frontiers in Plant Science 2, p. 54 (2011)

Klie, S.; Krueger, S.; Krall, L.; Giavalisco, P.; Fluegge, U.-I.; Willmitzer, L.; Steinhauser, D.: Analysis of the compartmentalized metabolome – a validation of the non-aqueous fractionation technique. Frontiers in Plant Science 2, p. 55 (2011)

Krueger, S.; Giavalisco, P.; Krall, L.; Steinhauser, M.-C.; Buessis, D.; Usadel, B.; Fluegge, U.-I.; Fernie, A. R.; Willmitzer, L.; Steinhauser, D.: A Topological Map of the Compartmentalized Arabidopsis thaliana Leaf Metabolome. PLoS One 6 (3), p. e17806 (2011)

Lisec, J.; Romisch-Margl, L.; Nikoloski, Z.; Piepho, H. P.; Giavalisco, P.; Selbig, J.; Gierl, A.; Willmitzer, L.: Corn hybrids display lower metabolite variability and complex metabolite inheritance patterns. The Plant Journal 68 (2), pp. 326 - 336 (2011)

Osorio, S.; Bombarely, A.; Giavalisco, P.; Usadel, B.; Stephens, C.; Araguez, I.; Medina-Escobar, N.; Botella, M. A.; Fernie, A. R.; Valpuesta, V.: Demethylation of oligogalacturonides by FaPE1 in the fruits of the wild strawberry Fragaria vesca triggers metabolic and transcriptional changes associated with defence and development of the fruit. Journal of Experimental Botany 62 (8), pp. 2855 - 2873 (2011)

Tohge, T.; Ramos, M. S.; Nunes-Nesi, A.; Mutwil, M.; Giavalisco, P.; Steinhauser, D.; Schellenberg, M.; Willmitzer, L.; Persson, S.; Martinoia, E. et al.; Fernie, A. R.: Toward the storage metabolome: profiling the barley vacuole. Plant Physiology 157 (3), pp. 1469 - 1482 (2011)

Salem, M.A.; Giavalisco, P.: Semi-targeted Lipidomics of Plant Acyl Lipids Using UPLC-HR-MS in Combination with a Data-Independent Acquisition Mode. In: Methods in Molecular Biology, Vol. 1778, pp. 137 - 156 (Ed. Walker, J. M.). Humana Press, Clifton, N.J. (2018)

Krueger, S.; Steinhauser, D.; Lisec, J.; Giavalisco, P.: Analysis of Subcellular Metabolite Distributions Within Arabidopsis thaliana Leaf Tissue: A Primer for Subcellular Metabolomics. In: Arabidopsis Protocols, 3rd Edition, pp. 575 - 596. Humana Press, Totowa, NJ (2014)

Willmitzer, L.; Caldana, C.; Fernie, A. R.; Giavalisco, P.; MA, H.; Redestig, H.; Steinhauser, D.: Integrative Analysis of Transcriptome and Metabolome Data. In: Proceedings of the German Conference on Bioinformatics, Vol. 01. Proceedings of the German Conference on Bioinformatics, GCB 2007, Potsdam, Germany, September 26, 2007 - September 28, 2007. (2007)

Mubeen, U.; Giraldi, L.A.; Jueppner, J.; Giavalisco, P.: A Multi-Omics Extraction Method for the In-Depth Analysis of Synchronized Cultures of the Green Alga Chlamydomonas reinhardtii. (2019)

Salem, M.A.; Bernach, M.; Bajdzienko, K.; Giavalisco, P.: A Simple Fractionated Extraction Method for the Comprehensive Analysis of Metabolites, Lipids, and Proteins from a Single Sample. (2017)

Sulpice, R.; Ishihara, H.; Schlereth, A.; Cawthray, G. R.; Encke, B.; Giavalisco, P.; Ivakov, A.; Arrivault, S.; Jost, R.; Krohn, N. et al.; Kuo, J.; Laliberte, E.; Pearse, S. J.; Raven, J. A.; Scheible, W.-R.; Teste, F.; Veneklaas, E. J.; Stitt, M.; Lambers, H.: Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. (2013)