Publications of the Group

Journal Article (161)

  1. 1.
    Andersen, U. B.; Kjaer, K. H.; Erban, A.; Alpers, J.; Hincha, D. K.; Kopka, J.; Zuther, E.; Pagter, M.: Impact of seasonal warming on overwintering and spring phenology of blackcurrant. Environmental and Experimental Botany 140, pp. 96 - 109 (2017)
  2. 2.
    Dethloff, F.; Orf, I.; Kopka, J.: Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves. Plant Methods 13 (1), 87 (2017)
  3. 3.
    Glaubitz, U.; Li, X.; Schaedel, S.; Erban, A.; Sulpice, R.; Kopka, J.; Hincha, D. K.; Zuther, E.: Integrated analysis of rice transcriptomic and metabolomic responses to elevated night temperatures identifies sensitivity- and tolerance-related profiles. Plant, Cell and Environment 40 (1), pp. 121 - 137 (2017)
  4. 4.
    Kopka, J.; Schmidt, S.; Dethloff, F.; Pade, N.; Berendt, S.; Schottkowski, M.; Martin, N.; Dühring, U.; Kuchmina, E.; Enke, H. et al.; Kramer, D.; Wilde, A.; Hagemann, M.; Friedrich, A.: Systems analysis of ethanol production in the genetically engineered cyanobacterium Synechococcus sp. PCC 7002. Biotechnology for Biofuels 10 (1), 56 (2017)
  5. 5.
    Pagter, M.; Alpers, J.; Erban, A.; Kopka, J.; Zuther, E.; Hincha, D. K.: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana. BMC Genomics 18 (1), 731 (2017)
  6. 6.
    Rahmoune, B.; Morsli, A.; Khelifi-Slaoui, M.; Khelifi, L.; Strueh, A.; Erban, A.; Kopka, J.; Prell, J.; van Dongen, J. T.: Isolation and characterization of three new PGPR and their effects on the growth of Arabidopsis and Datura plants. Journal of Plant Interaction 12 (1), pp. 1 - 6 (2017)
  7. 7.
    Rotsch, A.H.; Kopka, J.; Feussner, I.; Ischebeck, T.: Central metabolite and sterol profiling divides tobacco male gametophyte development and pollen tube growth into eight metabolic phases. The Plant Journal 92 (1), pp. 129 - 146 (2017)
  8. 8.
    Treves, H.; Murik, O.; Kedem, I.; Eisenstadt, D.; Meir, S.; Rogachev, I.; Szymanski, J.; Keren, N.; Orf, I.; Tiburcio, A. F. et al.; Alcazar, R.; Aharoni, A.; Kopka, J.; Kaplan, A.: Metabolic Flexibility Underpins Growth Capabilities of the Fastest Growing Alga. Current Biology 27 (16), pp. 2559 - 2567 (2017)
  9. 9.
    Zarza, X.; Atanasov, K. E.; Marco, F.; Arbona, V.; Carrasco, P.; Kopka, J.; Fotopoulos, V.; Munnik, T.; Gomez-Cadenas, A.; Tiburcio, A. F. et al.; Alcazar, R.: Polyamine oxidase 5 loss-of-function mutations in Arabidopsis thaliana trigger metabolic and transcriptional reprogramming and promote salt stress tolerance. Plant, Cell and Environment 40 (4), pp. 527 - 542 (2017)
  10. 10.
    Coleto, I.; Trenas, A. T.; Erban, A.; Kopka, J.; Pineda, M.; Alamillo, J. M.: Functional specialization of one copy of glutamine phosphoribosyl pyrophosphate amidotransferase in ureide production from symbiotically fixed nitrogen in Phaseolus vulgaris. Plant, Cell and Environment 39 (8), pp. 1767 - 1779 (2016)
  11. 11.
    Fuentes, P.; Zhou, F.; Erban, A.; Karcher, D.; Kopka, J.; Bock, R.: A new synthetic biology approach allows transfer of an entire metabolic pathway from a medicinal plant to a biomass crop. eLife 5, e13664 (2016)
  12. 12.
    Gal, A.; Wirth, R.; Kopka, J.; Fratzl, P.; Faivre, D.; Scheffel, A.: Macromolecular recognition directs calcium ions to coccolith mineralization sites. Science 353 (6299), pp. 590 - 593 (2016)
  13. 13.
    Hilker, M.; Schwachtje, J.; Baier, M.; Balazadeh, S.; Bäurle, I.; Geiselhardt, S.; Hincha, D. K.; Kunze, R.; Mueller-Roeber, B.; Rillig, M. C. et al.; Rolff, J.; Romeis, T.; Schmülling, T.; Steppuhn, A.; van Dongen, J.; Whitcomb, S. J.; Wurst, S.; Zuther, E.; Kopka, J.: Priming and memory of stress responses in organisms lacking a nervous system. Biological Reviews 91 (4), pp. 1118 - 1133 (2016)
  14. 14.
    Lee, Y. P.; Funk, C.; Erban, A.; Kopka, J.; Koehl, K. I.; Zuther, E.; Hincha, D. K.: Salt stress responses in a geographically diverse collection of Eutrema/Thellungiella spp. accessions. Functional Plant Biology 43, pp. 590 - 606 (2016)
  15. 15.
    Lortzing, T.; Calf, O. W.; Boehlke, M.; Schwachtje, J.; Kopka, J.; Geuss, D.; Kosanke, S.; van Dam, N. M.; Steppuhn, A.: Extrafloral nectar secretion from wounds of Solanum dulcamara. Nature Plants 2 (5), 16056 (2016)
  16. 16.
    Mumm, R.; Hageman, J. A.; Calingacion, M. N.; de Vos, R. C. H.; Jonker, H. H.; Erban, A.; Kopka, J.; Hansen, T. H.; Laursen, K. H.; Schjoerring, J. K. et al.; Ward, J. L.; Beale, M. H.; Jongee, S.; Rauf, A.; Habibi, F.; Indrasari, S. D.; Sakhan, S.; Ramli, A.; Romero, M.; Reinke, R. F.; Ohtsubo, K.; Boualaphanh, C.; Fitzgerald, M. A.; Hall, R. D.: Multi-platform metabolomics analyses of a broad collection of fragrant and non-fragrant rice varieties reveals the high complexity of grain quality characteristics. Metabolomics 12 (2), 38 (2016)
  17. 17.
    Orf, I.; Timm, S.; Bauwe, H.; Fernie, A. R.; Hagemann, M.; Kopka, J.; Nikoloski, Z.: Can cyanobacteria serve as a model of plant photorespiration? - a comparative meta-analysis of metabolite profiles. Journal of Experimental Botany 67 (10), pp. 2941 - 2952 (2016)
  18. 18.
    Orf, I.; Schwarz, D.; Kaplan, A.; Kopka, J.; Hess, W.R.; Hagemann, M.; Klähn, S.: CyAbrB2 contributes to the transcriptional regulation of low CO2 acclimation in synechocystis sp. PCC 6803. Plant and Cell Physiology 57 (10), pp. 2232 - 2243 (2016)
  19. 19.
    Pade, N.; Erdmann, S.; Enke, H.; Dethloff, F.; Duehring, U.; Georg, J.; Wambutt, J.; Kopka, J.; Hess, W. R.; Zimmermann, R. et al.; Kramer, D.; Hagemann, M.: Insights into isoprene production using the cyanobacterium Synechocystis sp PCC 6803. Biotechnology for Biofuels 9, 89 (2016)
  20. 20.
    Rudovich, N. N.; Pivovarova, O.; Mazuch, J.; Wendt, S.; Tuvia, N.; Kruse, M.; Nikiforova, V.; Murahovschi, V.; Erban, A.; Mosig, A. et al.; Sticht, C.; Goegebakan, O.; Willmitzer, L.; Kramer, A.; Pfeiffer, A. F.: Insulin directly regulates clock gene expression in the insulin-dependent tissues in vivo and in vitro. Diabetologia 59, p. S324 - S324 (2016)
 
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